- PHYlogenetic REconstruction by use of gene eXpression and alternate mRNA splicing patterns
PHYREX v.1.1 released !!
Updated versions of the documentation documents are also released.
Phyrex is a program for reconstructing ancestral gene expression
profiles and sequence data on a given phylogenetic tree. The program
uses a Minimum Evolution algorithm to reconstruct the gene expression
profiles and a combination of BaseML and ClustalW to reconstruct the
Phyrex can be downloaded from this site. The latest version of the program are found under "Software" in the menu at the right side. Any download of this program follows the terms given in the section "Copyrights" and the terms that are following PAML and ClustalW.
© Copyright 2003 - 2004 by Roald Rossnes/Computational Biology Unit/University of Bergen. The software package is provided "as is" without warranty of any kind. In no event shall the author or his ``employer'' be held responsible for any damage resulting from the use of this software, including but not limited to the frustration that you may experience in using the package. The program package, including source codes, example data sets, executables, and this documentation, is distributed free of charge for academic use only. Permission is granted to copy and use programs in the package provided no fee is charged for it and provided that this copyright notice is not removed.